PUBLICATIONS

Clara A. Fuchsman, Matthew D. Hays, Paulina Huanca-Valenzuela, Benjamin P. Gregory, Louis V. Plough, Megan E. Duffy, Richard G. Keil; Xuefeng Peng. Linking mesozooplankton and SAR11 bacteria in Oxygen Deficient Zones and the open ocean, submitted.

Megan E. Duffy, Clara A. Fuchsman, Khadijah K. Homolka, Jacquelyn A. Neibauer, Allan H. Devol, Richard G. Keil. High-resolution marine flux and in situ N2 production rate determinations in the eastern tropical north pacific oxygen deficient zone, in prep.

Megan E. Duffy, Nicolas D. Ward, Khadijah K. Homolka, Jacquelyn A. Neibauer, Richard G. Keil, Jeffrey E. Richey. A peptidomic view into organic matter processing in the lower Amazon River, in prep.

Megan E. Duffy, Cheyenne Adams, Khadijah K. Homolka, Jacquelyn A. Neibauer, Lawrence M. Mayer, Richard G. Keil. Tracking peptide-level changes during microbial degradation of marine diatom protein in seawater, Frontiers in Marine Science, 2022.

Jacob Cram, Clara A. Fuchsman, Megan E. Duffy, Jessica L. Pretty, Rachel M. Lekanoff, Jacquelyn A. Neibauer, Shirley W. Leung, Klaus B. Huebert, Thomas S. Weber, Daniele Bianchi, Natalya Evans, Allan H. Devol, Richard G. Keil, Andrew M.P. McDonnell. ‘Efficient flux transfer throughout the Eastern Tropical North Pacific Oxygen Deficient Zone is due to slow particle remineralization rather than suppressed disaggregation’, Global Biogeochemical Cycles, 2022.

Megan E. Duffy, Jacquelyn A. Neibauer, Jamee Adams, Rachel A. Lundeen, Clara A. Fuchsman, Anitra E. Ingalls, Gabrielle Rocap, Richard G. Keil. Protein cycling in the eastern tropical North Pacific oxygen deficient zone: a de novo-discovery peptidomic approach, Limnology and Oceanography, 2022.

Clara A. Fuchsman, Hilary I. Palevsky, Brittany Widner, Megan E. Duffy, Michael C.G. Carlson, Jacquelyn A. Neibauer, Margaret R. Mulholland, Richard G. Keil, Allan H. Devol, Gabrielle Rocap. Cyanobacteria and cyanophage contributions to carbon and nitrogen cycling in an oligotrophic oxygen-deficient zone The ISME Journal, 2019.

Mak A. Saito, Erin M. Bertrand, Megan E. Duffy, David A. Gaylord, Noelle A. Held, William Judson Hervey, Robert L. Hettich, Pratik Jagtap, Michael G. Janech, Danie B. Kinkade, Dasha Leary, Matthew McIlvin, Eli Moore, Robert Morris, Benjamin A. Neely, Brook Nunn, Jaclyn K. Saunders, Adam Shepherd, Nicholas Symmonds, David Walsh. Progress and Challenges in Ocean Metaproteomics and Proposed Best Practices for Data Sharing Journal of Proteome Research, 2019.

Ashima Bhattacharjee, Haojun Yang, Megan E. Duffy, Emily Robinson, Arianrhod Conrad-Antoville, Ya-Wen Lu, Tony Capps, Lelita Braiterman, Michael Wolfgang, Michael P Murphy, Ling Yi, Stephen G Kaler, Svetlana Lutsenko, Martina Ralle. The activity of Menkes disease protein ATP7A is essential for redox balance in mitochondria Journal of Biological Chemistry, 2016.

Mathilde L. Bonnemaison, Megan E. Duffy, Martina Ralle, Richard E. Mains, and Betty A. Eipper. Copper, Zinc and Calcium: three metals needed by one anterior pituitary secretory granule enzyme Metallomics, 2016.

Mathilde L. Bonnemaison, Nils B{\"a}ck, Megan E. Duffy, Martina Ralle, Richard E. Mains, and Betty A. Eipper. Adaptor Protein-1 Complex Affects the Endocytic Trafficking and Function of Peptidylglycine $\alpha$-Amidating Monooxygenase, a Luminal Cuproenzyme The Journal of Biological Chemistry, 2015.

Savannah Tallino, Megan E. Duffy, Martina Ralle, Mar{\'i}a Paz Cort{\'e}s, Mauricio Latorre, and Jason L. Burkhead. Nutrigenomics Analysis Reveals That Copper Deficiency and Dietary Sucrose up-Regulate Inflammation, Fibrosis and Lipogenic Pathways in a Mature Rat Model of Nonalcoholic Fatty Liver Disease The Journal of Nutritional Biochemistry, 2015.

Kellen Voss, Christopher Harris, Martina Ralle, Megan Duffy, Charles Murchison, and Joseph F. Quinn. Modulation of Tau Phosphorylation by Environmental Copper Translational Neurodegeneration, 2014.